ThpsCr005 (rnl') Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCr005	chloroplast	(rnl')	122411	125301	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524834	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0065

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

ThpsCr002 (rnl) 0.985	bd1545 (bd1545) psbC 0.9441	bd1313 (bd1313) psbH 0.8758	bd1287 (bd1287) PRK09281 0.8735	ThpsCr004 (rrn5') 0.8452	ThpsCr003 (rrn5) 0.8426
ThpsCp017 (atpA) ATP synthase CF1 alpha subunit 0.8413	ThpsCr001 (rns) 0.8261	ThpsCr006 (rns') 0.8176	bd951 (bd951) NA 0.8036

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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