ThpsCt013 (trnG(gcc)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt013	chloroplast	(trnG(gcc))	55235	55306	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524837	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0011	0.46	23000000 7400

Most Highly Correlated Transcripts

ThpsCt008 (trnI(cau)) 0.7922	ThpsCt009 (trnS(gcu)) 0.7775	plastidpH 0.7599	bd980 (bd980) chlI 0.7517	ThpsCp142 (ycf89') hypothetical protein 0.749	bd729 (bd729) NA 0.7267
ThpsCt004 (trnR(ucu)) 0.7249	ThpsCp043 (chlI) Mg-protoporyphyrin IX chelatase 0.7245	bd1048 (bd1048) PS_I_psaC 0.712	bd1039 (bd1039) psbV 0.7051

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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