ThpsCt009 (trnS(gcu)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt009	chloroplast	(trnS(gcu))	49735	49821	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524777	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0083	0.43	1.6 20000

Most Highly Correlated Transcripts

ThpsCt008 (trnI(cau)) 0.9462	ThpsCt004 (trnR(ucu)) 0.8754	ThpsCt010 (trnD(guc)) 0.8585	bd1290 (bd1290) atpH 0.8344	ThpsCt003 (trnV(uac)) 0.8342	ThpsCt023 (trnQ(uug)) 0.8313
bd598 (bd598) atpG 0.8253	bd1192 (bd1192) Acyl_ACP_Desat 0.8239	bd1378 (bd1378) atpI 0.8174	bd683 (bd683) Peptidase_M14_like superfamily 0.8163

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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