ThpsCt004 (trnR(ucu)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt004	chloroplast	(trnR(ucu))	19750	19822	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524851	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0255

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0009	0.42	0.000093 390000

Most Highly Correlated Transcripts

ThpsCt003 (trnV(uac)) 0.943	bd1720 (bd1720) ftsH 0.9419	bd1563 (bd1563) atpB 0.9399	bd1318 (bd1318) atpF 0.9337	bd1023 (bd1023) atpD 0.9318	bd598 (bd598) atpG 0.9316
bd1290 (bd1290) atpH 0.9285	bd1378 (bd1378) atpI 0.9253	bd467 (bd467) Cytochrome_b_N 0.9037	bd794 (bd794) NA 0.8965

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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