ThpsCt021 (trnL(uag)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt021	chloroplast	(trnL(uag))	72622	72703	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524883	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0336

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0003	0.47	11000 2

Most Highly Correlated Transcripts

ThpsCt028 (trnL(uag)') 0.9734	ThpsCp138 (rbcR) LysR transcriptional regulator 0.7879	bd1258 (bd1258) fer2 0.7557	bd989 (bd989) rps20 0.7071	270332 hypothetical protein 0.7049	ThpsCt010 (trnD(guc)) 0.7046
bd1080 (bd1080) NA 0.691	bd1267 (bd1267) rpoB 0.6837	bd1251 (bd1251) rps18 0.6729	ThpsCt009 (trnS(gcu)) 0.6696

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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