Phatr_hclust_0100 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0006334 nucleosome assembly 0.000944374 1 Phatr_hclust_0100
GO:0007001 chromosome organization and biogenesis (sensu Eukaryota) 0.00106853 1 Phatr_hclust_0100
GO:0007018 microtubule-based movement 0.00334528 1 Phatr_hclust_0100
GO:0000074 regulation of cell cycle 0.00428592 1 Phatr_hclust_0100
GO:0016117 carotenoid biosynthesis 0.00886694 1 Phatr_hclust_0100
GO:0006464 protein modification 0.171749 1 Phatr_hclust_0100
GO:0006355 regulation of transcription, DNA-dependent 0.487367 1 Phatr_hclust_0100
GO:0006508 proteolysis and peptidolysis 0.495352 1 Phatr_hclust_0100

Members

PHATRDRAFT_15264 : kinesin-like protein (Motor_domain superfamily)
PHATRDRAFT_12783 : cell division cycle protein 20 homolog (COG2319)
PHATRDRAFT_45765 : cell wall surface anchor family protein
PHATRDRAFT_37861 :
PHATRDRAFT_54396 : fasciclin domain protein (Fasciclin)
PHATRDRAFT_44054 :
PHATRDRAFT_47183 :
PHATRDRAFT_54229 : (FH2 superfamily)
PHATRDRAFT_2382 : pt repeat family protein
PHATRDRAFT_45877 :
PHATRDRAFT_46314 :
PHATRDRAFT_43904 : phytoene dehydrogenase (crtI_fam)
PHATRDRAFT_47587 : hypothetical glycine-rich protein
PHATRDRAFT_48351 :
PHATRDRAFT_15440 : kinesin-related protein klpa-like protein (KISc_C_terminal)
PHATRDRAFT_54381 : multiple banded antigen (H15)
PHATRDRAFT_41241 :
PHATRDRAFT_47840 : (UBQ superfamily)
PHATRDRAFT_44577 :
PHATRDRAFT_11823 : histone h2b (PLN00158)
PHATRDRAFT_47185 : transposase (DDE_3)
PHATRDRAFT_33858 :
PHATRDRAFT_47573 :
PHATRDRAFT_11841 : histone 3 (PTZ00018)
PHATRDRAFT_6311 : two component regulator three y domain protein
PHATRDRAFT_49020 : viral a-type inclusion (ANK)
PHATRDRAFT_54395 : beta-ig-h3 fasciclin (COG2335)
PHATRDRAFT_47140 :
PHATRDRAFT_38879 : tetratricopeptide tpr_2 (TPR_12)
PHATRDRAFT_43046 : cyclin b3 (CYCLIN)
PHATRDRAFT_47571 : proteophosphoglycan ppg4
PHATRDRAFT_47755 :
PHATRDRAFT_48061 :
PHATRDRAFT_46673 :
PHATRDRAFT_47720 : eyespot globule-associated protein 1
PHATRDRAFT_49734 : protein familywith a coiled coil-4 domain (Methyltransf_22)
PHATRDRAFT_40472 :
PHATRDRAFT_48067 :
PHATRDRAFT_49933 : elicitin protein ram6
PHATRDRAFT_40692 : (PHA03247)
PHATRDRAFT_44397 : sam domain and hd1 (COG1078)
PHATRDRAFT_16379 : myosin heavy chain-like protein (MYSc)
PHATRDRAFT_46095 : cyclin b (CYCLIN)
PHATRDRAFT_37270 :
PHATRDRAFT_39559 :
PHATRDRAFT_34754 :
PHATRDRAFT_47544 : proteophosphoglycan ppg4
PHATRDRAFT_43221 :
PHATRDRAFT_48544 :
PHATRDRAFT_48125 :
PHATRDRAFT_45068 : cell wall surface anchor family protein
PHATRDRAFT_47727 :
PHATRDRAFT_46018 :
PHATRDRAFT_43937 :
PHATRDRAFT_48730 :
PHATRDRAFT_44820 :
PHATRDRAFT_5467 : importin alpha 1b (ARM)
PHATRDRAFT_45556 :
PHATRDRAFT_49571 : alpha 3 frustulin
PHATRDRAFT_46198 :
PHATRDRAFT_42439 : membrane protein (Rhomboid)
PHATRDRAFT_47561 :
PHATRDRAFT_42951 : viral a-type inclusion (Cast)
PHATRDRAFT_44511 :
PHATRDRAFT_50138 : (Nipped-B_C)
PHATRDRAFT_22319 : importin alpha-2 (SRP1)
PHATRDRAFT_46203 : cell surface flocculin
PHATRDRAFT_50494 :
PHATRDRAFT_48365 : gtpase activator protein (RabGAP-TBC superfamily)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -0.477 0.000505051
Copper_SH Copper_SH 0.455 0.000515464
Green_vs_Red_24h Green_vs_Red_24h -0.240 0.003125
Silver_SH Silver_SH -0.897 0.000555556
Cadmium_1.2mg Cadmium_1.2mg -0.435 0.00104167
BlueLight_24h BlueLight_24h -0.087 0.701384
GreenLight_0.5h GreenLight_0.5h -4.173 0.000458716
RedLight_6h RedLight_6h 0.049 0.755882
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 0.891
GreenLight_24h GreenLight_24h -0.038 0.889977
light_6hr light_6hr 0.255 0.0458763
dark_8hr_light_3hr dark_8hr_light_3hr -0.695 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h 0.269 0.00128205
Ammonia_SH Ammonia_SH -1.889 0.000344828
Simazine_SH Simazine_SH -0.467 0.000423729
Oil_SH Oil_SH 0.434 0.000666667
Salinity_15ppt_SH Salinity_15ppt_SH 0.643 0.000609756
Cadmium_SH Cadmium_SH -0.449 0.000666667
Blue_vs_Red_24h Blue_vs_Red_24h -0.290 0.0030303
highlight_0to6h highlight_0to6h -0.043 0.885472
BlueLight_0.5h BlueLight_0.5h -4.147 0.000462963
Dispersant_SH Dispersant_SH 0.276 0.000909091
light_16hr_dark_4hr light_16hr_dark_4hr 1.097 0.000943396
light_15.5hr light_15.5hr 1.710 0.000625
light_10.5hr light_10.5hr 1.222 0.000561798
Dispersed_oil_SH Dispersed_oil_SH 0.305 0.000675676
Si_free Si_free -0.094 0.332407
Re-illuminated_0.5h Re-illuminated_0.5h -4.000 0.000396825
Mixture_SH Mixture_SH -2.111 0.000357143
Blue_vs_Red_6h Blue_vs_Red_6h 0.136 0.245578
light_16hr_dark_30min light_16hr_dark_30min 1.680 0.000735294
BlueLight_6h BlueLight_6h 0.186 0.0441463
highlight_12to48h highlight_12to48h 0.346 0.000980392
RedLight_24h RedLight_24h 0.203 0.0256881
Dark_treated Dark_treated -3.676 0.000446429
GreenLight_6h GreenLight_6h -0.083 0.430307
Cadmium_0.12mg Cadmium_0.12mg -0.132 0.00185185
Blue_vs_Green_24h Blue_vs_Green_24h -0.049 0.273429
RedLight_0.5h RedLight_0.5h -4.149 0.000555556
Green_vs_Red_6h Green_vs_Red_6h -0.133 0.242282
Re-illuminated_24h Re-illuminated_24h 0.515 0.000657895

Motifs

MEME Output