Phatr_hclust_0141 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006396 | RNA processing | 0.00010905 | 0.343506 | Phatr_hclust_0141 |
| GO:0006350 | transcription | 0.00415482 | 1 | Phatr_hclust_0141 |
| GO:0016481 | negative regulation of transcription | 0.00936417 | 1 | Phatr_hclust_0141 |
| GO:0051336 | regulation of hydrolase activity | 0.0278439 | 1 | Phatr_hclust_0141 |
| GO:0042254 | ribosome biogenesis and assembly | 0.0278439 | 1 | Phatr_hclust_0141 |
| GO:0006352 | transcription initiation | 0.0549522 | 1 | Phatr_hclust_0141 |
| GO:0006306 | DNA methylation | 0.0899841 | 1 | Phatr_hclust_0141 |
| GO:0006865 | amino acid transport | 0.123783 | 1 | Phatr_hclust_0141 |
| GO:0006511 | ubiquitin-dependent protein catabolism | 0.1917 | 1 | Phatr_hclust_0141 |
| GO:0006418 | tRNA aminoacylation for protein translation | 0.218189 | 1 | Phatr_hclust_0141 |
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PHATRDRAFT_17029 : rna polymerase sigma factor (Sig70-cyanoRpoD) |
PHATRDRAFT_31465 : atp synthase alpha subunit mitochondrial (RecA-like_NTPases superfamily) |
PHATRDRAFT_18579 : at1g56110 t6h22_9 (SIK1) |
PHATRDRAFT_48338 : caf1 family (CAF1 superfamily) |
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PHATRDRAFT_20335 : dhx33 protein (HA2) |
PHATRDRAFT_44096 : rna methylase (COG0116) |
PHATRDRAFT_36743 : (Ribosomal_L7Ae) |
PHATRDRAFT_9235 : rpa2_schpo probable dna-directed rna polymerase i subunit rpa2 (dna-directed rna polymerase i polypeptide 2) (rna polymerase i subunit 2) (RpoB) |
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PHATRDRAFT_43579 : lethal in the absence of ssd1-v (Las1 superfamily) |
PHATRDRAFT_15639 : mitochondrial carrier protein (Mito_carr) |
PHATRDRAFT_30585 : transcription-repair coupling factor (HELICc) |
PHATRDRAFT_37009 : tfp pilus assembly |
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PHATRDRAFT_39714 : dead (asp-glu-ala-asp) box polypeptide 28 (DEXDc superfamily) |
PHATRDRAFT_5128 : proteasome component pre2 precursor (Ntn_hydrolase superfamily) |
PHATRDRAFT_47056 : tpr domain protein |
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PHATRDRAFT_51277 : drg-like obg family gtpase fused to an rna binding domain tgsfun11p (DRG) |
PHATRDRAFT_21922 : gtp-binding protein era (era) |
PHATRDRAFT_47943 : (MIF4G) |
PHATRDRAFT_48410 : brain protein 16 (DUF383 superfamily) |
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PHATRDRAFT_15354 : rrp5 protein homolog (programmed cell death protein 11) |
PHATRDRAFT_39419 : mitochondrial outer membrane beta-barrel protein tob55 omp85 sam50 (Bac_surface_Ag superfamily) |
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PHATRDRAFT_41745 : loc496075 protein (UPF0160) |
PHATRDRAFT_8000 : rnafamily protein (SpoU_methylase superfamily) |
PHATRDRAFT_54710 : protein arginine n-methyltransferase prote (AdoMet_MTases) |
PHATRDRAFT_44311 : sam-dependent methyltransferase-like (COG1092) |
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PHATRDRAFT_11088 : leucyl-trnacytoplasmic (leucine--trna ligase) (PLN02959) |
PHATRDRAFT_15019 : rrna methylase family protein (SpoU) |
PHATRDRAFT_14996 : yggt family membrane protein (YGGT) |
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PHATRDRAFT_47116 : polymeraseiii (dna directed) polypeptide c |
PHATRDRAFT_50071 : amino acid transporter-like protein (Aa_trans superfamily) |
PHATRDRAFT_51630 : calcitonin gene-related peptide-receptor component protein (RNA_pol_Rpb4) |
PHATRDRAFT_16364 : phosphatidylinositol 4-kinase (PI3Kc_like superfamily) |
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PHATRDRAFT_39052 : pentatricopeptiderepeat-containing protein (PPR_2) |
PHATRDRAFT_46132 : transportin 2 (importinkaryopherin beta 2b) (KAP95) |
PHATRDRAFT_55067 : programmed cell death 2 (PDCD2_C superfamily) |
PHATRDRAFT_14366 : (PTZ00168) |
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PHATRDRAFT_43677 : ribonuclease ii (RNB) |
PHATRDRAFT_44242 : u3 snornp protein utp4 (WD40 superfamily) |
PHATRDRAFT_16911 : yad7_schpo uncharacterized rna methyltransferase (TrmA) |
PHATRDRAFT_17059 : conserved hypothetical portein |
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PHATRDRAFT_45715 : (SAP) |
PHATRDRAFT_50103 : glutamate ornithine acetyltransferase (DUF647 superfamily) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.614 | 0.000505051 |
| Copper_SH | Copper_SH | 0.269 | 0.000952381 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.209 | 0.0166667 |
| Silver_SH | Silver_SH | 0.098 | 0.16246 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.164 | 0.00104167 |
| BlueLight_24h | BlueLight_24h | 0.204 | 0.0455556 |
| GreenLight_0.5h | GreenLight_0.5h | -0.385 | 0.11615 |
| RedLight_6h | RedLight_6h | -0.910 | 0.000694444 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | 0.084 | 0.617134 |
| light_6hr | light_6hr | -1.455 | 0.000561798 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.782 | 0.00060241 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.011 | 0.908562 |
| Ammonia_SH | Ammonia_SH | 3.458 | 0.000344828 |
| Simazine_SH | Simazine_SH | -0.307 | 0.00078125 |
| Oil_SH | Oil_SH | 0.183 | 0.0188356 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | 0.081 | 0.320596 |
| Cadmium_SH | Cadmium_SH | -0.378 | 0.000666667 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.329 | 0.00166667 |
| highlight_0to6h | highlight_0to6h | 0.381 | 0.000806452 |
| BlueLight_0.5h | BlueLight_0.5h | -0.765 | 0.0102564 |
| Dispersant_SH | Dispersant_SH | -0.072 | 0.371077 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.111 | 0.174706 |
| light_15.5hr | light_15.5hr | -0.169 | 0.325 |
| light_10.5hr | light_10.5hr | -1.680 | 0.000561798 |
| Dispersed_oil_SH | Dispersed_oil_SH | -0.085 | 0.273563 |
| Si_free | Si_free | 0.084 | 0.385714 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -0.937 | 0.000396825 |
| Mixture_SH | Mixture_SH | 3.251 | 0.000357143 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.233 | 0.0591463 |
| light_16hr_dark_30min | light_16hr_dark_30min | 0.041 | 0.85993 |
| BlueLight_6h | BlueLight_6h | -0.677 | 0.000581395 |
| highlight_12to48h | highlight_12to48h | 0.920 | 0.000555556 |
| RedLight_24h | RedLight_24h | -0.125 | 0.287154 |
| Dark_treated | Dark_treated | -2.295 | 0.000446429 |
| GreenLight_6h | GreenLight_6h | -0.688 | 0.000609756 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.017 | 0.595779 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.120 | 0.0211538 |
| RedLight_0.5h | RedLight_0.5h | 0.167 | 0.588484 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.222 | 0.0726744 |
| Re-illuminated_24h | Re-illuminated_24h | 0.311 | 0.000657895 |
