21676 DUF2252 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21676	chr_3	DUF2252 superfamily	575541	578430	+	DUF2252 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444699	Thaps21676.2, Thaps21676.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0469

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0095	0.37	17 410000

Most Highly Correlated Transcripts

16607 PcbC 0.8867	22908 hypothetical protein 0.8811	bd736 (bd736) NA 0.8769	7725 hypothetical protein 0.874	268194 (Tp_Myb4R1b) SANT 0.8692	20989 hypothetical protein 0.8591
24142 hypothetical protein 0.8554	8980 hypothetical protein 0.8525	20596 hypothetical protein 0.8513	263610 COG3899 0.8444

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF2252 superfamily		Uncharacterized protein conserved in bacteria (DUF2252); This domain, found in various hypothetical...	-	248.681	7.74E-75	290 - 723	superfamily	268213

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	119371	Cre17.g709300.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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