23332 COG0790Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23332	chr_7	COG0790	26134	32438	+	COG0790

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450627	Thaps23332.6, Thaps23332.4, Thaps23332.3, Thaps23332.2, Thaps23332.1, Thaps23332.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0242

Most Highly Correlated Transcripts

23207 hypothetical protein 0.8973	24231 C2 superfamily 0.896	24347 COG3899 0.894	25451 AAA superfamily 0.8911	10753 hypothetical protein 0.8899	5904 NhaP 0.8893
10409 hypothetical protein 0.8891	21190 SAC3_GANP 0.8886	4047 hypothetical protein 0.888	22252 hypothetical protein 0.8866

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG0790		FOG: TPR repeat, SEL1 subfamily [General function prediction only]	-	70.8435	2.21E-13	853 - 1024	multi-dom	223861

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48662	PHATRDRAFT_48662	181523	236676	Not available	Cre03.g197400.t1.2	AT1G18260.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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