23894 hypothetical proteinThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
23894	chr_8	hypothetical protein	1253482	1265578	+	hypothetical protein

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444972	Thaps23894.52, Thaps23894.51, Thaps23894.47, Thaps23894.36, Thaps23894.33, Thaps23894.55, Thaps23894.24, Thaps23894.10, Thaps23894.57, Thaps23894.45, Thaps23894.23, Thaps23894.15, Thaps23894.56, Thaps23894.32, Thaps23894.31, Thaps23894.2, Thaps23894.27, Thaps23894.54, Thaps23894.21, Thaps23894.37, Thaps23894.7, Thaps23894.46, Thaps23894.42, Thaps23894.4, Thaps23894.14, Thaps23894.1, Thaps23894.9, Thaps23894.53, Thaps23894.40, Thaps23894.30, Thaps23894.43, Thaps23894.20, Thaps23894.3, Thaps23894.16, Thaps23894.18, Thaps23894.22, Thaps23894.13, Thaps23894.19, Thaps23894.35, Thaps23894.49, Thaps23894.11, Thaps23894.12, Thaps23894.41, Thaps23894.39, Thaps23894.29, Thaps23894.38, Thaps23894.48, Thaps23894.17, Thaps23894.28, Thaps23894.44, Thaps23894.6, Thaps23894.50, Thaps23894.34, Thaps23894.5, Thaps23894.25, Thaps23894.26, Thaps23894.8

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0474

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0095	0.37	17 410000

Most Highly Correlated Transcripts

bd1941 (bd1941) NA 0.9823	bd410 (bd410) HNHc 0.9431	bd415 (bd415) arom_aa_hydroxylase superfamily 0.8972	40445 Dynein_heavy superfamily 0.8849	bd1841 (bd1841) CAP10 superfamily 0.8647	bd1808 (bd1808) NA 0.8621
22889 HMGB-UBF_HMG-box 0.8428	8258 CHD 0.8207	23334 hypothetical protein 0.8155	25435 hypothetical protein 0.8043

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004339 -

Add comment

Log in to post comments