2399 Str_synth superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2399 chr_2 Str_synth superfamily 896542 897796 - Str_synth superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446542 Thaps2399.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0201

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0013
 0.47

Most Highly Correlated Transcripts

2400

MFS_1
0.8497

5180

hypothetical protein
0.8311

269866

Gst
0.7945

bd1155

(bd1155) GCS superfamily
0.7861

25295

Gst
0.7829

268172

Peptidase_M50B
0.7769

32805

AAA
0.7755

21785

Pyr_redox_2
0.7704

6692

hypothetical protein
0.7679

3630

hypothetical protein
0.7624

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Str_synth superfamily Strictosidine synthase; Strictosidine synthase (E.C. 4.3.3.2) is a key enzyme in alkaloid... - 69.7383 7.57E-15 188 - 287 superfamily 268086

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44479 PHATRDRAFT_44479 Not available Not available 366695 Cre12.g549050.t1.2 AT3G57030.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009058 GO:0016844 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016844

strictosidine synthase activity

Details: 
Catalysis of the reaction: 3alpha(S)-strictosidine + H(2)O = secologanin + tryptamine.
GO Category: 
MF

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