24315 GRX_PICOT_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24315 chr_11a GRX_PICOT_like 278226 279467 - GRX_PICOT_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7443283 Thaps24315.1, Thaps24315.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0313

Most Highly Correlated Transcripts

bd1840

(bd1840) NA
0.8362

7070

hypothetical protein
0.8079

16114

PLN02350
0.8006

11296

(Tp_fungal_TRF3) regulator [Rayko]
0.7829

22918

hypothetical protein
0.7823

bd1841

(bd1841) CAP10 superfamily
0.7759

39741

(APM3) AP-3_Mu3_Cterm
0.7747

4960

Cyt-b5
0.774

11295

(Tp_fungal_TRF2) regulator [Rayko]
0.7667

13448

Sec1
0.7637

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT... cl00388 166.129 1.44E-50 166 - 251 specific 239326
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 79.6227 1.58E-18 25 - 109 superfamily 260398
GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT... cl00388 166.129 1.44E-50 166 - 251 specific 239326
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 79.6227 1.58E-18 25 - 109 superfamily 260398
Thioredoxin_like superfamily Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX... - 79.6227 1.58E-18 25 - 109 superfamily 260398

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_27972 PHATRDRAFT_27972 209507 261772 434451 Cre04.g232602.t1.1 AT4G04950.1 352783

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0006118 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0006118

NA

Details: 
NA
GO Category: 
NA

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