25284 (Tp_CCCH6) GLE1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25284 chr_17 (Tp_CCCH6) GLE1 superfamily 434988 438318 + GLE1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442133 Thaps25284.2, Thaps25284.4, Thaps25284.3, Thaps25284.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0252

Most Highly Correlated Transcripts

bd1949

(bd1949) NA
0.9406

24063

COG3899
0.8807

11261

WD40 superfamily
0.8786

36937

PI3Kc_like superfamily
0.8761

bd446

(bd446) HrpA
0.8702

bd392

(bd392) DEXDc
0.8699

20808

hypothetical protein
0.8697

5788

TFIIS_M
0.8673

12836

EEP superfamily
0.866

bd624

(bd624) Glyco_transf_34 superfamily
0.8645

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GLE1 superfamily GLE1-like protein; The members of this family are sequences that are similar to the human protein... - 62.3271 8.04E-11 414 - 653 superfamily 254452

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42841 PHATRDRAFT_42841 Not available 321812 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0004308 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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