25309 ABC_ATPaseThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25309	chr_17	ABC_ATPase	567028	569590	-	ABC_ATPase

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453090	Thaps25309.2, Thaps25309.1, Thaps25309.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0326

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0084	0.43	0.00000000066 0.00000023

Most Highly Correlated Transcripts

2958 PROCN 0.916	5777 PRO8NT 0.911	2959 hypothetical protein 0.9099	992 hypothetical protein 0.8988	11434 hypothetical protein 0.8964	34533 AAA_11 0.8958
260975 (nhe3) Na_H_Exchanger 0.8886	2941 hypothetical protein 0.8881	15246 NhaP 0.8862	4865 hypothetical protein 0.8862

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABC_ATPase		Predicted ATPase of the ABC class; Members of this family include various bacterial predicted ABC...	-	283.334	1.59E-86	210 - 598	multi-dom	255582

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_42881	PHATRDRAFT_42881	169632	220148	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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