260975 (nhe3) Na_H_Exchanger
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260975 chr_1 (nhe3) Na_H_Exchanger 1656726 1658513 + Na_H_Exchanger

Synonyms

NCBI ID Ensembl Genomes exon ID
7451532 Thaps260975.3, Thaps260975.2, Thaps260975.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0327

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0189
 0.32

Most Highly Correlated Transcripts

10873

NA
0.9103

33699

TRX_family
0.895

261258

(ZFP7) PHD
0.8944

42543

2OG-FeII_Oxy_2
0.8928

25309

ABC_ATPase
0.8886

261614

SPRY_RanBP_like
0.8883

261078

Na_H_Exchanger
0.888

32217

MA3
0.8859

168

(RPB1) PRK08566
0.8847

261472

WD40 superfamily
0.8847

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Na_H_Exchanger Sodium/hydrogen exchanger family; Na/H antiporters are key transporters in maintaining the pH of... cl00454 147.374 2.26E-39 77 - 448 specific 250283
TM_PBP1_branched-chain-AA_like superfamily Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC... - 147.374 2.26E-39 77 - 448 superfamily 260432

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50516 PHATRDRAFT_50516 208136 321866 212309 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments