26136 MRS6 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26136 chr_2 MRS6 superfamily 2173336 2174983 + MRS6 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450430 Thaps26136.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0116
 0.38

Most Highly Correlated Transcripts

270222

0.9578

39696

PTZ00295
0.9022

32945

(SDH1) sdhB
0.8988

5584

P4Hc
0.8902

263742

Synaptobrevin
0.8899

261711

Sulfotransfer_1 superfamily
0.8858

32760

PDEase_I
0.8855

1850

PKc_like superfamily
0.884

7617

hypothetical protein
0.8838

4399

Methyltransf_22 superfamily
0.8764

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MRS6 superfamily RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational... - 673.24 0 30 - 460 superfamily 248232

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14827 PHATRDRAFT_14827 171253 317434 438194 Cre09.g388467.t1.1 AT5G09550.1 284351

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005093 GO:0015031 GO:0043087 -

GO:0005093

Rab GDP-dissociation inhibitor activity

Details: 
Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding.
GO Category: 
MF

GO:0015031

protein transport

Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0043087

regulation of GTPase activity

Details: 
Any process that modulates the rate of GTP hydrolysis by a GTPase.
GO Category: 
BP

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