261531 GlnA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261531 chr_2 GlnA 2001226 2003532 - GlnA

Synonyms

NCBI ID Ensembl Genomes exon ID
7452342 Thaps261531.1, Thaps261531.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0166

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0034
 0.54

Most Highly Correlated Transcripts

5871

Methyltransf_21 superfamily
0.8852

262348

53EXOc
0.8845

31136

Pkinase_Tyr
0.8837

24624

HSP70_NBD
0.8802

1906

hypothetical protein
0.8795

268737

hypothetical protein
0.8763

263866

AAK superfamily
0.8758

13448

Sec1
0.8665

264598

AAA
0.8663

40704

WD40
0.8654

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine... cl00220 127 1.53E-33 72 - 248 specific 238245
cysteine_hydrolases superfamily Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine... - 127 1.53E-33 72 - 248 superfamily 260273
Gln-synt_C superfamily Glutamine synthetase, catalytic domain; Glutamine synthetase, catalytic domain. - 195.511 8.29E-57 434 - 685 superfamily 249604
Gln-synt_C superfamily Glutamine synthetase, catalytic domain; Glutamine synthetase, catalytic domain. - 195.511 8.29E-57 434 - 685 superfamily 249604
GlnA Glutamine synthetase [Amino acid transport and metabolism] - 251.019 1.06E-74 310 - 748 multi-dom 223252

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 202974 244157 57493 Cre06.g305500.t1.2 AT3G53180.1 256750

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004356 GO:0006807 -

GO:0004356

glutamate-ammonia ligase activity

Details: 
Catalysis of the reaction: L-glutamate + ATP + NH(4)(+) = L-glutamine + ADP + 2 H(+) + phosphate.
GO Category: 
MF

GO:0006807

nitrogen compound metabolic process

Details: 
The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO Category: 
BP

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