261817 LPLAT_AGPAT-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261817 chr_3 LPLAT_AGPAT-like 1125021 1125782 - LPLAT_AGPAT-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7441873 Thaps261817.2, Thaps261817.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0206

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0256
 0.42

Most Highly Correlated Transcripts

6028

NA
0.9182

bd624

(bd624) Glyco_transf_34 superfamily
0.9165

262977

NA
0.9093

9512

PTZ00168
0.898

261126

DadA
0.8969

25040

NA
0.8925

31003

gpsA
0.8867

10731

DENR_C
0.8855

6504

CDP-OH_P_transf superfamily
0.8845

40148

(UBC2) UBCc
0.8748

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like;... cl17185 160.9 7.32E-49 38 - 227 specific 153251
LPLAT superfamily Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; Lysophospholipid... - 160.9 7.32E-49 38 - 227 superfamily 266537

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 450766 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0008152 GO:0008415 GO:0003841 GO:0008654 GO:0016020 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008415

NA

Details: 
NA
GO Category: 
NA

GO:0003841

1-acylglycerol-3-phosphate O-acyltransferase activity

Details: 
Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.
GO Category: 
MF

GO:0008654

phospholipid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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