262069 KefB
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262069 chr_4 KefB 428289 430660 - KefB

Synonyms

NCBI ID Ensembl Genomes exon ID
7442092 Thaps262069.2, Thaps262069.3, Thaps262069.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0081
 0.42

Most Highly Correlated Transcripts

4710

KefB
0.9253

268908

Trans_IPPS_HH
0.8859

bd1777

(bd1777) NA
0.8832

bd392

(bd392) DEXDc
0.8495

bd446

(bd446) HrpA
0.8418

4465

hypothetical protein
0.8348

38576

PLN03227
0.8346

28326

lytB_ispH
0.8215

10809

hypothetical protein
0.8206

36235

p450 superfamily
0.8131

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] cl10482 205.551 7.34E-59 147 - 544 specific 223551
KefB superfamily Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] - 205.551 7.34E-59 147 - 544 superfamily 245312
TrkA_N superfamily TrkA-N domain; This domain is found in a wide variety of proteins. These protein include potassium... - 60.6603 4.47E-11 568 - 691 superfamily 251184
TrkA_N superfamily TrkA-N domain; This domain is found in a wide variety of proteins. These protein include potassium... - 60.6603 4.47E-11 568 - 691 superfamily 251184
PRK10669 putative cation:proton antiport protein; Provisional - 105.566 5.20E-24 165 - 713 multi-dom 182633

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_39274 PHATRDRAFT_39274 260848 191131 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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