262126 Fe_hyd_lg_C superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262126	chr_4	Fe_hyd_lg_C superfamily	822429	824926	+	Fe_hyd_lg_C superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453325	Thaps262126.4, Thaps262126.3, Thaps262126.9, Thaps262126.5, Thaps262126.7, Thaps262126.8, Thaps262126.1, Thaps262126.6, Thaps262126.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0327

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0147	0.38	0.21 17000

Most Highly Correlated Transcripts

bd453 (bd453) Mito_carr 0.8966	3478 hypothetical protein 0.8688	21568 hypothetical protein 0.867	39062 SpoU 0.865	261601 PA14 0.8586	bd1877 (bd1877) NA 0.858
13308 PLN02948 0.8537	264498 PRK00142 0.8521	bd1840 (bd1840) NA 0.8519	30969 (Tp_Myb1R11) COG5114 0.8468

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fe_hyd_lg_C superfamily		Iron only hydrogenase large subunit, C-terminal domain; Iron only hydrogenase large subunit, C-...	-	184.334	7.07E-54	132 - 453	superfamily	251611

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_48846	PHATRDRAFT_48846	216966	205976	233302	Cre03.g200550.t1.2	AT4G16440.1	258585

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008901 GO:0016948 GO:0016949 GO:0016950 GO:0016951 -

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