262457 60KD_IMP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262457 chr_5 60KD_IMP 635754 637154 - 60KD_IMP

Synonyms

NCBI ID Ensembl Genomes exon ID
7446403 Thaps262457.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0292

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

23887

hypothetical protein
0.9083

42621

HisS
0.9047

3416

TPR
0.8952

264345

SpoU
0.8942

268443

SAICAR_synt_Sc
0.8929

5053

hypothetical protein
0.8904

40044

(MAP1) PLN03158
0.8902

23102

TCP1_epsilon
0.8881

21933

RNA_pol_I_A49 superfamily
0.8869

268714

TypA_BipA
0.8869

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
60KD_IMP 60Kd inner membrane protein; 60Kd inner membrane protein. cl00489 131.528 8.71E-36 196 - 389 specific 251083
60KD_IMP superfamily 60Kd inner membrane protein; 60Kd inner membrane protein. - 131.528 8.71E-36 196 - 389 superfamily 260457

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9161 PHATRDRAFT_9161 152391 243869 252174 Cre16.g690200.t1.2 AT5G62050.1 Not available

KEGG

KEGG description KEGG Pathway
Protein export map03060

GO Terms

GO:0016021 GO:0051205 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0051205

protein insertion into membrane

Details: 
The process that results in the incorporation of a protein into a biological membrane.
GO Category: 
BP

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