262700 Dpy-30 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262700	chr_6	Dpy-30 superfamily	296857	297198	+	Dpy-30 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448397	Thaps262700.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0056

Most Highly Correlated Transcripts

263554 SK 0.8622	263817 Bromodomain 0.8321	261867 (rfC_2) PRK12402 0.8304	36246 MPP_superfamily superfamily 0.7983	36206 Rer1 0.798	17468 CK_II_beta 0.7891
9617 SNC1 0.7847	1294 hypothetical protein 0.7824	9189 hypothetical protein 0.778	263124 RRM_snRNP70 0.7778

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Dpy-30 superfamily		Dpy-30 motif; This motif is found in a wide variety of domain contexts. It is found in the Dpy-30...	-	61.4651	6.25E-14	69 - 110	superfamily	253069

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50120	PHATRDRAFT_50120	185174	177078	Not available	Cre06.g279100.t1.2	Not available	355015

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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