262858 (IKI3) IKI3Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262858	chr_6	(IKI3) IKI3	940903	944960	-	IKI3

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442344	Thaps262858.8, Thaps262858.7, Thaps262858.3, Thaps262858.4, Thaps262858.1, Thaps262858.5, Thaps262858.2, Thaps262858.9, Thaps262858.6

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0232

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0151	0.31	0.00000000045 250

Most Highly Correlated Transcripts

bd763 (bd763) NA 0.9183	24216 hypothetical protein 0.8877	33033 YSH1 0.8854	8503 DUF2431 0.8835	35723 HepA 0.8828	263669 UvrD 0.878
29778 Beach 0.8773	34412 Clp1 superfamily 0.8721	23105 Peptidase_S74 0.8676	21533 hypothetical protein 0.8676

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG5290 superfamily		IkappaB kinase complex, IKAP component [Transcription]	-	296.914	1.66E-83	219 - 1225	superfamily	227610
IKI3		IKI3 family; Members of this family are components of the elongator multi-subunit component of a...	-	474.478	5.67E-149	204 - 1066	multi-dom	252786

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43627	PHATRDRAFT_43627	180619	253661	Not available	Cre08.g372500.t1.2	AT5G13680.1	561412

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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