263116 rubredoxin
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263116 chr_7 rubredoxin 608081 608671 + rubredoxin

Synonyms

NCBI ID Ensembl Genomes exon ID
7449180 Thaps263116.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0071

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0174
 0.29

Most Highly Correlated Transcripts

bd718

(bd718) PRK10387
0.9244

38608

SDR_a5
0.921

bd1192

(bd1192) Acyl_ACP_Desat
0.9132

plastid_psb28

0.9019

4737

hypothetical protein
0.8988

38306

Chloroa_b-bind
0.8915

268192

Zip superfamily
0.889

14192

PLN02449
0.888

22673

NA
0.8876

36669

TPT
0.8867

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small... cl00202 72.3386 2.86E-17 98 - 149 specific 238372
rubredoxin_like superfamily Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes... - 72.3386 2.86E-17 98 - 149 superfamily 260256
COG1773 Rubredoxin [Energy production and conversion] - 70.0158 2.27E-16 91 - 149 multi-dom 224687

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16606 PHATRDRAFT_16606 204354 192676 46707 Cre07.g315150.t1.2 AT1G54500.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0046872 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0046872

metal ion binding

Details: 
Interacting selectively and non-covalently with any metal ion.
GO Category: 
MF

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