263354 Fer4_NifH superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263354 chr_8 Fer4_NifH superfamily 287812 288921 - Fer4_NifH superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443480 Thaps263354.2, Thaps263354.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0113

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0006
 0.41

Most Highly Correlated Transcripts

926

hypothetical protein
0.8714

17214

PLN02512
0.8454

260829

GalK
0.8334

20776

hypothetical protein
0.83

36037

Trypsin_2
0.8106

37359

(CLPP6) S14_ClpP_2
0.8068

36078

PRX5_like
0.8028

30895

Aldo_ket_red
0.7996

416

(rfC_3) rfc
0.7933

17854

HemeO
0.7925

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 253.249 5.29E-83 143 - 346 superfamily 266552

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_5145 PHATRDRAFT_5145 162048 307723 Not available Not available AT2G34470.2 476498

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006461 GO:0016151 -

GO:0006461

protein complex assembly

Details: 
The aggregation, arrangement and bonding together of a set of components to form a protein complex.
GO Category: 
BP

GO:0016151

nickel cation binding

Details: 
Interacting selectively and non-covalently with nickel (Ni) cations.
GO Category: 
MF

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