263663 RPE65Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263663	chr_10	RPE65	490254	492506	+	RPE65

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451103	Thaps263663.4, Thaps263663.2, Thaps263663.1, Thaps263663.5, Thaps263663.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0068

Most Highly Correlated Transcripts

bd446 (bd446) HrpA 0.9182	bd624 (bd624) Glyco_transf_34 superfamily 0.9047	263994 Adaptin_N 0.8976	263997 (APA1) Adaptin_N 0.8874	bd1949 (bd1949) NA 0.8864	bd392 (bd392) DEXDc 0.886
bd1465 (bd1465) PKc_like superfamily 0.8846	12836 EEP superfamily 0.8844	262675 AAA 0.8815	7627 SPRY 0.8806

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RPE65		Retinal pigment epithelial membrane protein; This family represents a retinal pigment epithelial...	cl10080	333.814	2.97E-106	184 - 684	specific	251697
RPE65 superfamily		Retinal pigment epithelial membrane protein; This family represents a retinal pigment epithelial...	-	333.814	2.97E-106	184 - 684	superfamily	263961

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_4021	PHATRDRAFT_4021	Not available	Not available	447970	Cre16.g657800.t1.1	AT1G30100.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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