264096 COX17Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264096	chr_14	COX17	17089	17324	-	COX17

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450813	Thaps264096.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0181

Most Highly Correlated Transcripts

32209 fer2 0.8992	31113 Cyt_c_Oxidase_VIb 0.8927	23414 hypothetical protein 0.891	22432 UBCc 0.8896	23960 hypothetical protein 0.8879	36641 Aldolase_Class_I superfamily 0.8837
7250 hypothetical protein 0.8835	37934 GRX_PICOT_like 0.8815	31993 DUF3449 0.8808	37962 LSm3 0.88

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COX17 superfamily		Cytochrome C oxidase copper chaperone (COX17); Cox17 is essential for the assembly of functional...	-	63.433	4.31E-15	32 - 77	superfamily	252974
COX17 superfamily		Cytochrome C oxidase copper chaperone (COX17); Cox17 is essential for the assembly of functional...	-	63.433	4.31E-15	32 - 77	superfamily	252974

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	197499	178373	Not available	Cre05.g232850.t1.2	AT3G15352.1	285957

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

GO:0005507 GO:0005758 GO:0006825 GO:0016531 -

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