264598 AAA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264598 chr_19a_19 AAA 491006 493454 + AAA

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps264598.3, Thaps264598.4, Thaps264598.2, Thaps264598.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0234

Most Highly Correlated Transcripts

264598

AAA
1

40704

WD40
0.9076

20585

RanBD_family
0.9076

3959

KPHMT-like
0.9067

35780

rplC
0.9062

24874

hypothetical protein
0.9042

37497

cysE
0.9041

268577

(GGTA1) PLN02789
0.902

260891

WD40
0.9019

267933

S_TKc
0.9007

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 87.9719 4.71E-20 445 - 601 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 87.9719 4.71E-20 445 - 601 superfamily 267297
AAA ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety... - 66.2429 8.55E-13 454 - 603 multi-dom 214640

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13383 PHATR_13383 206676 259618 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000166 GO:0017111 GO:0005524 GO:0004298 GO:0004299 -

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0004298

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0004299

NA

Details: 
NA
GO Category: 
NA

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