264846 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264846 chr_22 Peptidase_C1A 703910 706244 - Peptidase_C1A

Synonyms

NCBI ID Ensembl Genomes exon ID
7443923 Thaps264846.3, Thaps264846.1, Thaps264846.4, Thaps264846.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0108

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

38767

Peptidase_C1 superfamily
0.9616

bd1808

(bd1808) NA
0.9024

bd410

(bd410) HNHc
0.8932

bd1841

(bd1841) CAP10 superfamily
0.8782

bd1793

(bd1793) NA
0.8734

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8729

24659

DnaQ_like_exo superfamily
0.8712

19977

TRX_family
0.8608

3661

MMCE
0.8592

268124

COG0429
0.8567

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 198.232 1.12E-58 463 - 692 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 198.232 1.12E-58 463 - 692 superfamily 260335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0008234 GO:0004215 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0004215

NA

Details: 
NA
GO Category: 
NA

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