26530 CzcD
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26530 chr_1 CzcD 445310 447165 - CzcD

Synonyms

NCBI ID Ensembl Genomes exon ID
7449150 Thaps26530.2, Thaps26530.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0016

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0081
 0.42

Most Highly Correlated Transcripts

263714

LPLAT_GPAT
0.8697

270378

hypothetical protein
0.8658

9352

LrgB superfamily
0.852

270222

0.8353

268592

VDE superfamily
0.8262

14655

(met) Rubis-subs-bind
0.8111

11474

hypothetical protein
0.8102

4370

hypothetical protein
0.807

5457

hypothetical protein
0.8057

33316

(DGD1) UGD_SDR_e
0.8052

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] cl00316 194.068 3.43E-58 51 - 393 specific 224151
Cation_efflux superfamily Cation efflux family; Members of this family are integral membrane proteins, that are found to... - 194.068 3.43E-58 51 - 393 superfamily 260348

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23557 PHATRDRAFT_23557 185721 260498 468178 Cre03.g145087.t1.1 AT2G46800.2 517016

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006812 GO:0008324 GO:0016020 -

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008324

cation transmembrane transporter activity

Details: 
Catalysis of the transfer of cation from one side of the membrane to the other.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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