9352 LrgB superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
9352 chr_13 LrgB superfamily 205377 207158 + LrgB superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452985 Thaps9352.3, Thaps9352.1, Thaps9352.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0023

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0260
 0.25

Most Highly Correlated Transcripts

bd1645

(bd1645) tpt
0.9433

bd1306

(bd1306) NA
0.9158

bd1893

(bd1893) NA
0.9148

bd1342

(bd1342) psaL
0.9129

bd1387

(bd1387) psbE
0.9015

bd718

(bd718) PRK10387
0.8975

bd1350

(bd1350) psaF
0.8953

bd463

(bd463) Aa_trans superfamily
0.8943

263714

LPLAT_GPAT
0.8919

bd1820

(bd1820) Fasciclin
0.8903

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LrgB superfamily LrgB-like family; The two products of the lrgAB operon are potential membrane proteins, and LrgA... - 112.617 1.40E-28 327 - 522 superfamily 260518

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45887 PHATRDRAFT_45887 184681 165200 224498 Cre09.g394850.t1.2 AT1G32080.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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