268226 (AMT4) Ammonium_transp superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268226 chr_2 (AMT4) Ammonium_transp superfamily 666138 672905 - Ammonium_transp superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450192 Thaps268226.3, Thaps268226.1, Thaps268226.4, Thaps268226.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0440

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0049
 0.45

Most Highly Correlated Transcripts

bd624

(bd624) Glyco_transf_34 superfamily
0.9346

bd1387

(bd1387) psbE
0.9316

bd1765

(bd1765) NA
0.9276

bd718

(bd718) PRK10387
0.9257

bd1820

(bd1820) Fasciclin
0.9228

bd2073

(bd2073) psbB
0.9082

bd1306

(bd1306) NA
0.9061

bd1304

(bd1304) Ycf4
0.9055

bd218

(bd218) Chloroa_b-bind superfamily
0.9049

bd392

(bd392) DEXDc
0.8999

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ammonium_transp superfamily Ammonium Transporter Family; Ammonium Transporter Family. - 337.318 1.69E-111 1 - 412 superfamily 261545

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13418 PHATR_13418 230306 256647 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006810 GO:0008519 GO:0016020 -

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008519

ammonium transmembrane transporter activity

Details: 
Catalysis of the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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