269316 fadE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269316 chr_7 fadE 1949248 1951974 - fadE

Synonyms

NCBI ID Ensembl Genomes exon ID
7443414 Thaps269316.3, Thaps269316.2, Thaps269316.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0440

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0030
 0.47

Most Highly Correlated Transcripts

35710

(ACD1) SCAD_SBCAD
0.8618

26365

fadJ
0.8443

bd1855

(bd1855) NA
0.8421

bd755

(bd755) RimI
0.7441

bd1842

(bd1842) NA
0.7295

34191

CobN_like
0.7235

35279

(H4_2) H4
0.7202

35523

ICL_PEPM
0.7198

10750

MDR8
0.7147

11182

PLN02545
0.7107

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1974 superfamily Domain of unknown function (DUF1974); Members of this family of functionally uncharacterized... - 176.518 8.64E-50 492 - 770 superfamily 255283
ACAD superfamily Acyl-CoA dehydrogenase; Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal acyl-CoA... - 119.68 3.89E-29 130 - 396 superfamily 263927
fadE acyl-CoA dehydrogenase; Reviewed - 715.825 0 48 - 780 multi-dom 236528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11014 PHATRDRAFT_11014 212170 192512 Not available Not available Not available 553352

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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