31035 Trypsin_2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31035 chr_1 Trypsin_2 1528690 1530432 + Trypsin_2

Synonyms

NCBI ID Ensembl Genomes exon ID
7445129 Thaps31035.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0269

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0022
 0.44

Most Highly Correlated Transcripts

25824

hypothetical protein
0.8633

42821

PRK14333
0.8553

41246

PRK14333
0.8499

2609

WD40 superfamily
0.8478

35087

TIGR00275
0.8472

9040

ELP3
0.8464

37374

PseudoU_synth superfamily
0.8412

268443

SAICAR_synt_Sc
0.8409

12899

AAA
0.8407

33476

diphth2_R
0.8367

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trypsin_2 Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. cl19303 75.7425 4.14E-16 120 - 268 specific 257693
Trypsin_2 superfamily Trypsin-like peptidase domain; This family includes trypsin like peptidase domains. - 75.7425 4.14E-16 120 - 268 superfamily 267656
Trypsin Trypsin; Trypsin. - 70.5501 5.10E-14 108 - 294 multi-dom 249578

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 251434 175448 430070 Cre13.g579901.t1.1 AT2G47940.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 GO:0004252 GO:0004289 GO:0008132 GO:0008243 GO:0008991 GO:0016808 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004252

serine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO Category: 
MF

GO:0004289

NA

Details: 
NA
GO Category: 
NA

GO:0008132

NA

Details: 
NA
GO Category: 
NA

GO:0008243

NA

Details: 
NA
GO Category: 
NA

GO:0008991

NA

Details: 
NA
GO Category: 
NA

GO:0016808

NA

Details: 
NA
GO Category: 
NA

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