31316 pyruv_ox_red
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31316 chr_1 pyruv_ox_red 883773 889589 - pyruv_ox_red

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0006

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0059
 0.44

Most Highly Correlated Transcripts

bd950

(bd950) NA
0.8766

264421

3a01204
0.8576

bd758

(bd758) NA
0.8575

4108

hypothetical protein
0.8465

bd951

(bd951) NA
0.8438

bd1893

(bd1893) NA
0.8435

bd463

(bd463) Aa_trans superfamily
0.8421

9258

HP_PGM_like
0.8402

bd439

(bd439) POLBc_alpha
0.8366

bd1983

(bd1983) RecA-like_NTPases superfamily
0.8357

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate... cl11410 122.225 4.07E-31 1 - 168 specific 132917
TPP_enzyme_PYR superfamily Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine... - 122.225 4.07E-31 1 - 168 superfamily 264357
TPP_enzymes superfamily Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes... - 514.075 4.83E-168 832 - 1186 superfamily 261022
FNR_like superfamily Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a... - 108.515 6.23E-25 1391 - 1612 superfamily 263080
PorG Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit... cl00546 105.146 6.46E-25 417 - 630 specific 223946
POR superfamily Pyruvate ferredoxin/flavodoxin oxidoreductase; This family includes a region of the large protein... - 105.146 6.46E-25 417 - 630 superfamily 260490
Flavodoxin_1 Flavodoxin; Flavodoxin. cl00438 96.3013 1.70E-22 1206 - 1337 specific 249722
FMN_red superfamily NADPH-dependent FMN reductase; NADPH-dependent FMN reductase. - 96.3013 1.70E-22 1206 - 1337 superfamily 260423
pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; This model represents a single chain... - 1343.27 0 1 - 1185 multi-dom 131231

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre02.g095137.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005489 GO:0005506 GO:0006118 GO:0016491 GO:0016625 -

GO:0005489

NA

Details: 
NA
GO Category: 
NA

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0016625

oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.
GO Category: 
MF

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