33231 PLN02779
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33231 chr_3 PLN02779 710172 711125 + PLN02779

Synonyms

NCBI ID Ensembl Genomes exon ID
7444731 Thaps33231.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0118
 0.28

Most Highly Correlated Transcripts

bd1645

(bd1645) tpt
0.9418

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9415

5240

ALAD_PBGS_aspartate_rich
0.9411

32723

Chloroa_b-bind
0.9358

bd218

(bd218) Chloroa_b-bind superfamily
0.932

31983

Chloroa_b-bind superfamily
0.9293

bd466

(bd466) cytochrome_b_C
0.9288

38715

PLN00120
0.927

575

PRK00062
0.9258

1091

hypothetical protein
0.923

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02779 haloacid dehalogenase-like hydrolase family protein cl19137 365.571 3.00E-126 25 - 293 specific 215416
HAD superfamily haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase. - 365.571 3.00E-126 25 - 293 superfamily 267490
COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] - 141.412 3.96E-40 54 - 284 multi-dom 223710

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_13261 PHATR_13261 259729 216403 428568 Cre14.g623000.t1.1 AT4G39970.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0008152 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

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