33670 RNRR2
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
33670 chr_4 RNRR2 1106179 1107692 - RNRR2

Synonyms

NCBI ID Ensembl Genomes exon ID
7453384 Thaps33670.2, Thaps33670.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0196
 0.36

Most Highly Correlated Transcripts

264345

SpoU
0.9492

3944

COG0218
0.9285

24123

fumC
0.9281

8541

PRK00142
0.9217

34596

WD40
0.9188

21050

Ras_like_GTPase superfamily
0.9169

24038

hypothetical protein
0.9159

39845

(DNA_TopoIV) PRK05560
0.9158

262400

ANK
0.9123

4372

hypothetical protein
0.9122

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RNRR2 Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain; Ribonucleotide... cl00264 391.218 6.20E-134 151 - 426 specific 153108
Ferritin_like superfamily Ferritin-like superfamily of diiron-containing four-helix-bundle proteins; Ferritin-like, diiron-... - 391.218 6.20E-134 151 - 426 superfamily 260311

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17523 PHATRDRAFT_17523 206256 252139 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004748 GO:0009186 -

GO:0004748

ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor

Details: 
Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.
GO Category: 
MF

GO:0009186

deoxyribonucleoside diphosphate metabolic process

Details: 
The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.
GO Category: 
BP

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