34077 ISN1 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
34077	chr_5	ISN1 superfamily	1556547	1558319	+	ISN1 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445171	Thaps34077.2, Thaps34077.3, Thaps34077.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0138

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0175	0.42	0.0000028 4700

Most Highly Correlated Transcripts

270222 0.885	6140 hypothetical protein 0.8265	10523 hypothetical protein 0.8249	39847 (APM2) AP-2_Mu2_Cterm 0.8248	7032 DUF2358 superfamily 0.8221	2799 hypothetical protein 0.822
9174 DUF563 0.8218	9729 COG0398 0.8183	6288 hypothetical protein 0.8174	1762 PRA1 superfamily 0.812

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ISN1 superfamily		IMP-specific 5'-nucleotidase; The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an...	-	316.929	1.12E-103	19 - 381	superfamily	253730

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_13606	PHATRDRAFT_13606	263138	159485	231552	Cre04.g225750.t1.1	Not available	502616

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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