37126 RRM_SF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37126 chr_13 RRM_SF superfamily 770554 772137 - RRM_SF superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450493 Thaps37126.1, Thaps37126.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0289

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0016
 0.55

Most Highly Correlated Transcripts

36007

Aldolase_II superfamily
0.9307

35136

NA
0.8878

36525

PRK09427
0.8876

21875

zf-CW
0.8768

37410

TCP1_alpha
0.8719

1770

hypothetical protein
0.8625

24525

hypothetical protein
0.8618

39470

PTZ00132
0.8611

11614

ATP_bind_1
0.8584

264556

FBPase
0.857

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 105.426 1.13E-28 91 - 162 superfamily 266524
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 105.426 1.13E-28 91 - 162 superfamily 266524

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51303 PHATRDRAFT_51303 171245 282582 426477 Cre01.g032300.t1.2 AT2G35410.1 348578

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

Add comment

Log in to post comments