37158 HepA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37158 chr_13 HepA 598466 602284 - HepA

Synonyms

NCBI ID Ensembl Genomes exon ID
7446947 Thaps37158.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0089

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0015
 0.38

Most Highly Correlated Transcripts

bd668

(bd668) NA
0.9495

bd529

(bd529) SNF2_N
0.9354

bd843

(bd843) NA
0.9116

bd1863

(bd1863) NA
0.9003

bd624

(bd624) Glyco_transf_34 superfamily
0.8995

bd1192

(bd1192) Acyl_ACP_Desat
0.8931

bd1387

(bd1387) psbE
0.892

bd446

(bd446) HrpA
0.8894

bd1949

(bd1949) NA
0.8869

bd890

(bd890) NA
0.8857

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SNF2_N SNF2 family N-terminal domain; This domain is found in proteins involved in a variety of processes... - 68.4672 1.41E-12 50 - 390 multi-dom 249654
HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and... - 80.5492 1.53E-15 627 - 770 multi-dom 223627

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 120859 Not available Not available 359412

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments