39143 (ANT1) PTZ00169
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39143 chr_1 (ANT1) PTZ00169 1635964 1637031 + PTZ00169

Synonyms

NCBI ID Ensembl Genomes exon ID
7451494 Thaps39143.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0324

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0020
 0.47

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.8349

36995

LplA
0.8134

10273

zf-met2
0.8126

267979

HCO3_cotransp superfamily
0.8118

36007

Aldolase_II superfamily
0.7968

40200

TRX_reduct
0.7952

4524

DHQS
0.7949

2318

Bromodomain
0.7893

23025

(RPL1) Ribosomal_L1
0.7869

38139

Chloroa_b-bind
0.7855

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.1263 6.33E-16 207 - 286 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.1263 6.33E-16 207 - 286 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.1263 6.33E-16 207 - 286 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.1263 6.33E-16 207 - 286 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.1263 6.33E-16 207 - 286 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 71.1263 6.33E-16 207 - 286 superfamily 249634
PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional - 397.987 5.06E-139 3 - 297 multi-dom 240302

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22873 PHATRDRAFT_22873 265539 67539 446535 Cre09.g386650.t2.1 AT4G28390.1 289206

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 GO:0005743 GO:0005215 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005743

mitochondrial inner membrane

Details: 
The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
GO Category: 
CC

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

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