10273 zf-met2Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10273	chr_15	zf-met2	784734	785126	+	zf-met2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443973	Thaps10273.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0231

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0190	0.26	0.22 0.93

Most Highly Correlated Transcripts

27083 eIF3_N superfamily 0.9247	263630 (MTS) tRNA_bind_EMAP-II_like 0.9074	41178 hisG 0.8949	20879 (Tp_CCCH21) regulator [Rayko] 0.8911	1374 RRM 0.8895	268688 hypothetical protein 0.8853
269399 PLN02678 0.8835	34413 RRM_ABT1_like 0.88	268443 SAICAR_synt_Sc 0.8778	41419 (RT4) RpsD 0.8773

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-met2 superfamily		Zinc-binding; This is small family of metazoan zinc-binding proteins.	-	58.65	9.42E-13	41 - 82	superfamily	205139
zf-met2 superfamily		Zinc-binding; This is small family of metazoan zinc-binding proteins.	-	58.65	9.42E-13	41 - 82	superfamily	205139

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_32272	PHATRDRAFT_32272	250221	192963	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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