39315 M20_dipept_like_CNDP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
39315 chr_1 M20_dipept_like_CNDP 2883798 2885995 - M20_dipept_like_CNDP

Synonyms

NCBI ID Ensembl Genomes exon ID
7445119 Thaps39315.2, Thaps39315.3, Thaps39315.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0326

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0211
 0.43

Most Highly Correlated Transcripts

6648

hypothetical protein
0.8726

23812

TrmA
0.8502

23667

hypothetical protein
0.8482

269925

AAA_12 superfamily
0.8477

270120

Uup
0.8451

15114

Zinc_peptidase_like superfamily
0.8342

40200

TRX_reduct
0.8318

261566

Bud13
0.8315

19623

RRM3_MEI2_like
0.828

21698

hypothetical protein
0.8264

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M20_dipept_like_CNDP M20 cytosolic nonspecific dipeptidases including anserinase and serum carnosinase; Peptidase M20... cl14876 746.338 0 11 - 484 specific 193551
Zinc_peptidase_like superfamily Zinc peptidases M18, M20, M28, and M42; Zinc peptidases play vital roles in metabolic and signaling... - 746.338 0 11 - 484 superfamily 265470
PRK08201 hypothetical protein; Provisional - 304.746 2.39E-97 21 - 482 multi-dom 169276

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18404 PHATRDRAFT_18404 236083 190744 Not available Cre12.g496950.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008237 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

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