3944 COG0218
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3944 chr_3 COG0218 2201885 2203525 + COG0218

Synonyms

NCBI ID Ensembl Genomes exon ID
7443798 Thaps3944.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0234
 0.27

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9908

21050

Ras_like_GTPase superfamily
0.9481

24217

hypothetical protein
0.9468

24123

fumC
0.9287

33670

RNRR2
0.9285

21110

Sun
0.9255

2392

hypothetical protein
0.9242

268598

COG1094
0.922

35911

COG1092
0.9218

4372

hypothetical protein
0.921

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YihA_EngB YihA (EngB) GTPase family; The YihA (EngB) subfamily of GTPases is typified by the E. coli YihA, an... cl17170 159.598 7.31E-46 229 - 412 specific 206665
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 159.598 7.31E-46 229 - 412 superfamily 266525
COG0218 Predicted GTPase [General function prediction only] - 163.556 7.80E-47 219 - 415 multi-dom 223296

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11634 PHATRDRAFT_11634 143112 186224 65615 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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