35911 COG1092
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35911 chr_8 COG1092 193216 194755 - COG1092

Synonyms

NCBI ID Ensembl Genomes exon ID
7443461 Thaps35911.1, Thaps35911.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0069
 0.35

Most Highly Correlated Transcripts

3944

COG0218
0.9218

21050

Ras_like_GTPase superfamily
0.9179

35207

YihA_EngB
0.9151

23245

hypothetical protein
0.9095

21110

Sun
0.9071

bd190

(bd190) SrmB
0.9003

24217

hypothetical protein
0.8983

5540

hypothetical protein
0.8978

4372

hypothetical protein
0.8972

22499

TrmA
0.8953

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RlmI_M_like superfamily Middle domain of the SAM-dependent methyltransferase RlmI and related proteins; This middle or... - 64.0208 1.50E-12 149 - 251 superfamily 211413
RlmI_M_like superfamily Middle domain of the SAM-dependent methyltransferase RlmI and related proteins; This middle or... - 64.0208 1.50E-12 149 - 251 superfamily 211413
COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] - 251.846 3.04E-78 107 - 482 multi-dom 224017

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44311 PHATRDRAFT_44311 186233 225830 52931 Cre16.g649400.t1.2 AT1G54310.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008757 -

GO:0008757

S-adenosylmethionine-dependent methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate.
GO Category: 
MF

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