40348 (cdc48) SpoVK
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
40348 chr_4 (cdc48) SpoVK 1284491 1286767 + SpoVK
NCBI ID Ensembl Genomes exon ID
7446110 Thaps40348.2, Thaps40348.3, Thaps40348.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059
Normalized Mean Residue
Thaps_bicluster_0156
0.33
hypothetical protein
0.9127
hypothetical protein
0.907
(HSP70_2) HYOU1-like_NBD
0.8998
(cdc48-2) CDC48
0.8923
hypothetical protein
0.8675
PRK00772
0.8533
PLN02338
0.851
hypothetical protein
0.8479
hypothetical protein
0.8472
hypothetical protein
0.8432
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 102.609 3.00E-25 118 - 252 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 102.609 3.00E-25 118 - 252 superfamily 267297
AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... cl18944 102.609 3.00E-25 118 - 252 specific 99707
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 102.609 3.00E-25 118 - 252 superfamily 267297
SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] - 472.771 7.69E-160 103 - 644 multi-dom 223540
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36597 PHATRDRAFT_36597 260828 322888 439359 Cre06.g269950.t1.2 AT5G03340.1 289062
KEGG description KEGG Pathway
Protein processing in endoplasmic reticulum map04141
GO:0000166 GO:0017111 GO:0005524 GO:0004003 GO:0004004 GO:0008026 GO:0008094 GO:0008186 GO:0015462 GO:0015616 GO:0016887 GO:0017116 GO:0042623 GO:0042624 GO:0042625 GO:0042626 -

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

ATP-dependent DNA helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of the DNA helix.
GO Category: 
MF

ATP-dependent RNA helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
GO Category: 
MF

ATP-dependent helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
GO Category: 
MF

DNA-dependent ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
GO Category: 
MF

RNA-dependent ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.
GO Category: 
MF

protein-transmembrane transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + protein(out) = ADP + phosphate + protein(in).
GO Category: 
MF

DNA translocase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded DNA molecule.
GO Category: 
MF

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

single-stranded DNA-dependent ATP-dependent DNA helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix.
GO Category: 
MF

ATPase activity, coupled

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction directly drives some other reaction, for example ion transport across a membrane.
GO Category: 
MF

ATPase activity, uncoupled

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction is not directly coupled to any other reaction.
GO Category: 
MF

ATPase activity, coupled to transmembrane movement of ions

Details: 
Catalysis of the transfer of an ion from one side of a membrane to the other, driven by the reaction: ATP + H2O = ADP + phosphate.
GO Category: 
MF

ATPase activity, coupled to transmembrane movement of substances

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO Category: 
MF
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