41122 MPN_eIF3hThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
41122	chr_6	MPN_eIF3h	1361623	1362853	+	MPN_eIF3h

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453281	Thaps41122.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0229

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0083	0.43	1.6 20000

Most Highly Correlated Transcripts

22334 hypothetical protein 0.8725	24414 (MAP2) PTZ00053 0.8705	268629 PseudoU_synth_RluCD_like 0.8699	40044 (MAP1) PLN03158 0.8671	37187 COG5354 0.8658	267979 HCO3_cotransp superfamily 0.8643
261047 Mito_carr 0.8559	268766 MdlB 0.8538	22599 hypothetical protein 0.8525	36321 hypothetical protein 0.8503

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MPN_eIF3h		Mpr1p, Pad1p N-terminal (MPN) domains without catalytic isopeptidase activity, found in eIF2h;...	cl13996	317.286	2.81E-107	12 - 287	specific	163696
MPN superfamily		Mpr1p, Pad1p N-terminal (MPN) domains; MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+) domains...	-	317.286	2.81E-107	12 - 287	superfamily	265414

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	270092	300834	352743	Cre16.g676314.t1.1	AT1G10840.1	Not available

KEGG

KEGG description	KEGG Pathway
RNA transport	map03013

GO Terms

Not available -

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