4287 PBPb
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
4287 chr_4 PBPb 655155 657955 + PBPb
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0449
EEP superfamily
0.9256
hypothetical protein
0.9099
PRP21_like_P superfamily
0.8908
Beach
0.889
hypothetical protein
0.8874
hypothetical protein
0.8868
hypothetical protein
0.8865
hypothetical protein
0.8863
CHD
0.8858
hypothetical protein
0.8856
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PBPb superfamily Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-... - 81.2654 3.65E-17 366 - 586 superfamily 238078
PBPb superfamily Bacterial periplasmic transport systems use membrane-bound complexes and substrate-bound, membrane-... - 81.2654 3.65E-17 366 - 586 superfamily 238078
PBPb Bacterial periplasmic substrate-binding proteins; bacterial proteins, eukaryotic ones are in PBPe - 87.3837 3.35E-19 370 - 579 multi-dom 214497
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0005215 GO:0006810 GO:0030288 -

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

outer membrane-bounded periplasmic space

Details: 
The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall.
GO Category: 
CC
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