4466 DNA_repr_REX1B
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4466 chr_4 DNA_repr_REX1B 1092053 1093217 + DNA_repr_REX1B

Synonyms

NCBI ID Ensembl Genomes exon ID
7453383 Thaps4466.1, Thaps4466.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0207

Most Highly Correlated Transcripts

36964

PLN02716
0.9188

37934

GRX_PICOT_like
0.9175

32096

GSH_gloB
0.9088

30701

PRK05279
0.9077

3341

hypothetical protein
0.9062

25068

hypothetical protein
0.9037

1165

HAM1
0.9026

269624

TIM_phosphate_binding superfamily
0.8998

6383

PTZ00162
0.899

41655

Chloroa_b-bind
0.8983

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DNA_repr_REX1B superfamily DNA repair REX1-B; This family of proteins includes Chlamydomonas reinhardtii REX1-B (Required for... - 128.937 1.36E-36 196 - 292 superfamily 259103
DNA_repr_REX1B superfamily DNA repair REX1-B; This family of proteins includes Chlamydomonas reinhardtii REX1-B (Required for... - 128.937 1.36E-36 196 - 292 superfamily 259103

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 269653 101902 Not available Not available Not available 320201

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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