6383 PTZ00162
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
6383 chr_6 PTZ00162 1441604 1442155 + PTZ00162
NCBI ID Ensembl Genomes exon ID
7453303 Thaps6383.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0181
Normalized Mean Residue
Thaps_bicluster_0120
0.39
Chloroa_b-bind
0.9248
YIP1 superfamily
0.9169
hypothetical protein
0.9107
hypothetical protein
0.909
PLN02716
0.9083
hypothetical protein
0.908
TIM_phosphate_binding superfamily
0.9074
hypothetical protein
0.907
hypothetical protein
0.9067
GRX_PICOT_like
0.9038
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S1_like superfamily S1_like: Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated... - 105.035 3.30E-29 85 - 171 superfamily 263921
RNAP_Rpb7_N_like superfamily RNAP_Rpb7_N_like: This conserved domain represents the N-terminal ribonucleoprotein (RNP) domain of... - 72.2147 4.48E-17 2 - 82 superfamily 262095
PTZ00162 DNA-directed RNA polymerase II subunit 7; Provisional - 146.388 3.81E-44 1 - 175 multi-dom 240298
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35680 PHATRDRAFT_35680 181715 242590 Not available Cre16.g667750.t1.2 AT5G59180.1 303395
KEGG description KEGG Pathway
RNA polymerase map03020
GO:0003899 GO:0006350 GO:0003900 GO:0003901 GO:0003902 -

DNA-directed RNA polymerase activity

Details: 
Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA
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